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Anomeric effect

Tendency of some substituents on a cyclohexane ring to prefer axial orientation

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Through Organic chemistry, Substituent and Carbohydrate

The term "anomeric effect" gained common usage by 1958, derived from the stereochemical designation for the lowest-numbered ring-carbon of a pyranose ring – the anomeric carbon. Anomeric molecules are isomers differing only in their configuration at the anomeric carbon; D-glucopyranose anomers are diastereomers, where the β-anomer is oriented such that the hydroxyl (−OH) group is pointed upwards equatorially, while the α-anomer hydroxyl points downward axially.

The anomeric effect can also be generalized to any cyclohexyl or linear system with the general formula C−Y−C−X, where Y is a heteroatom with one or more lone pairs, and X is an electronegative atom or group. The magnitude of the anomeric effect is estimated at 4–8 kJ/mol in the case of sugars, but is different for every molecule.

In the above case, the methoxy group (−O−CH3) on the cyclohexane ring (top) prefers the equatorial position. However, in the tetrahydropyran ring (bottom), the methoxy group prefers the axial position. This is because in the cyclohexane ring, Y = carbon, which is not a heteroatom, so the anomeric effect is not observed and sterics dominates the observed substituent position. In the tetrahydropyran ring, Y = oxygen, which is a heteroatom, so the anomeric effect contributes and stabilizes the observed substituent position. In both cases, X = methoxy group.

The anomeric effect is most often observed when Y = oxygen, but can also be seen with other lone pair bearing heteroatoms in the ring, such as nitrogen, sulfur, and phosphorus. The exact method by which the anomeric effect causes stabilization is a point of controversy, and several hypotheses have been proposed to explain it.

Physical explanation and controversy

The physical reason for the anomeric effect is not completely understood. Several, in part conflicting, explanations have been offered and the topic is still not settled.

Hyperconjugation

Cyclic molecules

A widely accepted explanation is that there is a stabilizing interaction (hyperconjugation) between the unshared electron pair on the endocyclic heteroatom (within the sugar ring) and the σ* orbital of the axial (exocyclic) C–X bond. This causes the molecule to align the donating lone pair of electrons antiperiplanar (180°) to the exocyclic C–X σ bond, lowering the overall energy of the system and causing more stability.

Some authors also question the validity of this hyperconjugation model based on results from the quantum theory of atoms in molecules. While most studies on the anomeric effects have been theoretical in nature, the n–σ* (hyperconjugation) hypothesis has also been extensively criticized on the basis that the electron density redistribution in acetals proposed by this hypothesis is not congruent with the known experimental chemistry of acetals and, in particular, the chemistry of monosaccharides.

Acyclic molecules

Hyperconjugation is also found in acyclic molecules containing heteroatoms, another form of the anomeric effect. If a molecule has an atom with a lone pair of electrons and the adjacent atom is able to accept electrons into the σ* orbital, hyperconjugation occurs, stabilizing the molecule. This forms a "no bond" resonance form. For this orbital overlap to occur, the trans, trans conformation is preferred for most heteroatoms, however for the stabilization to occur in dimethoxymethane, the gauche, gauche conformation is about 3–5 kcal/mol lower in energy (more stable) than the trans,trans conformation—this is about two times as big as the effect in sugars because there are two rotatable bonds (hence it is trans around both bonds or gauche around both) that are affected.

Dipole minimization

Another accepted explanation for the anomeric effect is the equatorial configuration has the dipoles involving both heteroatoms partially aligned, and therefore repelling each other. By contrast the axial configuration has these dipoles roughly opposing, thus representing a more stable and lower energy state.

Both the hyperconjugation and the dipole minimization contribute to the preferred (Z)-conformation of esters over the (E)-conformation. In the (Z) conformation the lone pair of electrons in the alpha oxygen can donate into the neighboring σ* C-O orbital. In addition, the dipole is minimized in the (Z)-conformation and maximized in the (E)-conformation.

n-n repulsions and C–H hydrogen bonding

If the lone pairs of electrons on the oxygens at the anomeric center of 2-methoxypyran are shown, then a brief examination of the conformations of the anomers reveal that the β-anomer always has at least one pair of eclipsing (coplanar 1,3-interacting) lone pairs, this n-n repulsion is a high energy situation. On the other hand, the α-anomer has conformations in which there are no n-n repulsions, and that is true in the exo-anomeric conformation. The energetically unfavourable n-n repulsion present in the β-anomer, coupled with the energetically favourable hydrogen bond between the axial H-5 and a lone pair of electrons on the axial α-anomeric substituent (C–H/n hydrogen bond), have been suggested [references 7 and 8] to account for most of the energetic difference between the anomers, the anomeric effect. The molecular mechanics program StruMM3D, which is not specially parameterized for the anomeric effect, estimates that the dipolar contributions to the anomeric effect (primarily the n-n repulsion, and C–H hydrogen bonding discussed above) are around 1.5 kcal/mol.

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