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Secale

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The genus Secale includes the cultivated rye and four to eleven wild species depending on the species criteria used. Commonly recognized species of the genus are the annuals, S. cereale, S. vavilovii Grouch, and S. sylvestre and perennial S. strictum (syn. S. montanum). Secale cereale includes cultivated rye and other weedy rye types. Secale strictum is a group that includes distinct geographical isolates. Secale vavilovii is the most different of the genus as it separated early from the other species in the genus.

Evolutionary history

Secale strictum subsp. africanum, Secale strictum anatolicum, Secale sylvestre, and Secale strictum subsp. strictum evolved in succession from a common ancestor of Secale after geographic separation and genetic differentiation. The annual weedy rye evolved from S. strictum subspecies strictum was domesticated to cultivated rye. Data suggests division of the genus into three species: the annual wild species S. sylvestre, the perennial wild species S. strictum including many subspecies, and S. cereale with cultivated and weedy rye subspecies.

Secale sylvestre is believed to be the most distant relative of S. cereale and most closely related to other outgroups. This is seen through lower rates of rye simple sequence repeat (SSR) sequences compared to other members of the genus Secale. Secale sylvestre is, therefore, the most ancient Secale species. Following separation of S. sylvestre from other taxa of the genus, perennial taxa also separated. Secale montanum descended directly from S. sylvestre and other perennial taxa originated from S. montanum. Perennial taxa are the progenitors of annual taxa. All annual taxa are most closely related and form a monophyletic group.

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