Anti-periplanar
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Through Organic chemistry, Molecular geometry and Functional group
Syn-periplanar or synperiplanar is similar to anti-periplanar. In the syn-periplanar conformer, the A and D are on the same side of the plane of the bond, with the dihedral angle of A−B and C−D between +30° and −30° (see Figure 2).
Molecular orbitals
An important factor in the antiperiplanar conformer is the interaction between molecular orbitals. Anti-periplanar geometry will put a bonding orbital and an anti-bonding orbital approximately parallel to each other, or syn-periplanar. Figure 6 is another representation of 2-chloro-2,3-dimethylbutane (Figure 5), showing the C–H bonding orbital, σC–H, and the C–Cl anti-bonding orbital, σ*C–Cl, syn-periplanar. The parallel orbitals can overlap and become involved in hyperconjugation. If the bonding orbital is an electron donor and the anti-bonding orbital is an electron acceptor, then the bonding orbital will be able to donate electronegativity into the anti-bonding orbital. This filled-to-unfilled donor-acceptor interaction has an overall stabilizing effect on the molecule. However, donation from a bonding orbital into an anti-bonding orbital will also result in the weakening of both of those bonds. In Figure 6, 2-chloro-2,3-dimethylbutane is stabilized through hyperconjugation from electron donation from σC-H into σ*C-Cl, but both C–H and C–Cl bonds are weakened. A molecular orbital diagram shows that the mixing of σC–H and σ*C–Cl in 2-chloro-2,3-dimethylbutane lowers the energy of both the orbitals (Figure 7).
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Examples of anti-periplanar geometry in mechanisms
E2 mechanism
A bimolecular elimination reaction will occur in a molecule where the breaking carbon-hydrogen bond and the leaving group are anti-periplanar (Figure 8). This geometry is preferred because it aligns σC-H and σ*C-X orbitals. Figure 9 shows the σC-H orbital and the σ*C-X orbital parallel to each other, allowing the σC-H orbital to donate into the σ*C-X anti-bonding orbital through hyperconjugation. This serves to weaken C-H and C-X bond, both of which are broken in an E2 reaction. It also sets up the molecule to more easily move its σC-H electrons into a πC-C orbital (Figure 10).
Pinacol rearrangement
In the pinacol rearrangement, a methyl group is found anti-periplanar to an activated alcohol functional group. This places the σC–C orbital of the methyl group parallel with the σ*C–O orbital of the activated alcohol. Before the activated alcohol leaves as H2O the methyl bonding orbital donates into the C–O antibonding orbital, weakening both bonds. This hyperconjugation facilitates the 1,2-methyl shift that occurs to remove water. See Figure 11 for the mechanism.
History, etymology, and misuse
The term anti-periplanar was first coined by Klyne and Prelog in their work entitled "Description of steric relationships across single bonds", published in 1960. ‘Anti’ refers to the two functional groups lying on opposite sides of the plane of the bond. ‘Peri’ comes from the Greek word for ‘near’ and so periplanar means “approximately planar”. In their article “Periplanar or Coplanar?” Kane and Hersh point out that many organic textbooks use anti-periplanar to mean completely anti-planar, or anti-coplanar, which is technically incorrect.