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Hydroxyl radical

Neutral form of the hydroxide ion

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Through Radical (chemistry), Atmospheric chemistry and Corrosion

In nature, hydroxyl radicals are most notably produced from the decomposition of hydroperoxides (ROOH) or, in atmospheric chemistry, by the reaction of excited atomic oxygen with water. They are also significant in radiation chemistry, where their formation can lead to hydrogen peroxide and oxygen, which in turn can accelerate corrosion and stress corrosion cracking in environments such as nuclear reactor coolant systems. Other important formation pathways include the UV-light dissociation of hydrogen peroxide (H2O2) and the Fenton reaction, where trace amounts of reduced transition metals catalyze the breakdown of peroxide.

In organic synthesis, hydroxyl radicals are most commonly generated by photolysis of 1-hydroxy-2(1H)-pyridinethione.

The hydroxyl radical is often referred to as the "detergent" of the troposphere because it reacts with many pollutants, often acting as the first step to their removal. It also has an important role in eliminating some greenhouse gases like methane and ozone. The rate of reaction with the hydroxyl radical often determines how long many pollutants last in the atmosphere, if they do not undergo photolysis or are rained out. For instance, methane, which reacts relatively slowly with hydroxyl radicals, has an average lifetime of >5 years and many CFCs have lifetimes of 50+ years. Other pollutants, such as larger hydrocarbons, can have very short average lifetimes of less than a few hours.

Its first reaction with many volatile organic compounds (VOCs) is the removal of a hydrogen atom, forming water and an alkyl radical (R•):

HO• + RH → H2O + R•

The alkyl radical typically reacts rapidly with oxygen, forming a peroxy radical:

R• + O2 → ROO•

The fate of this radical in the troposphere depends on factors such as the amount of sunlight, other pollution in the atmosphere, and the nature of the alkyl radical that it formed from (see chapters 12 & 13 in External Links "University Lecture notes on Atmospheric chemistry").

Biological significance

Hydroxyl radicals can occasionally be produced as a byproduct of immune action. Macrophages and microglia most frequently generate this compound when exposed to very specific pathogens, such as certain bacteria. The destructive action of hydroxyl radicals has been implicated in several neurological autoimmune diseases such as HIV-associated dementia, when immune cells become over-activated and toxic to neighboring healthy cells.

The hydroxyl radical can damage virtually all types of macromolecules: carbohydrates, nucleic acids (mutations), lipids (lipid peroxidation), and amino acids (e.g. conversion of Phe to m-tyrosine and o-tyrosine). The hydroxyl radical has a very short in vivo half-life of approximately 10−9 seconds and a high reactivity. This makes it a very dangerous compound to the organism. Due to high physiological concentrations of bicarbonate and carbonate in the cell, as well as the rapid reactivity of hydroxyl radicals, some of the oxidative damage attributed to hydroxyl radical may instead be due to carbonate radical formation (CO3•–).

Unlike superoxide, which can be detoxified by superoxide dismutase, the hydroxyl radical cannot be eliminated by an enzymatic reaction. Mechanisms for scavenging peroxyl radicals for the protection of cellular structures include endogenous antioxidants such as melatonin and glutathione, and dietary antioxidants such as mannitol and vitamin E.

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