Indigenous people of New Guinea

Origin and genetics

The origin of Papuans is generally associated with the first settlement of Australasia by a lineage dubbed "Australasians" or "Australo-Papuans" during the Initial Upper Paleolithic, which is "ascribed to a population movement with uniform genetic features and material culture" (Ancient East Eurasians), and sharing deep ancestry with modern East Asian peoples and other Asia-Pacific groups. It is estimated that people reached Sahul (the geological continent consisting of Australia and New Guinea) between 37,000 and 50,000 years ago. Rising sea levels separated New Guinea from Australia about 10,000 years ago. However, Aboriginal Australians and Papuans had diverged genetically much earlier, around 40,000 years BP. Papuans are more closely related to Melanesians than to Aboriginal Australians.

Haplogroups

The majority of Papuan Y-DNA haplogroups belong to subclades of haplogroup MS, and haplogroup C1b2a. The frequency of each haplogroup varies along geographic clines.

Autosomal DNA

The genetic makeup of Papuans is primarily derived from Ancient East Eurasians, which relates them to other mainland Asian groups such as the Ancient Ancestral South Indians (AASI), Andamanese, as well as East and Southeast Asians, although there is possible gene flow from an earlier Out-of-Africa (xOoA) group, around 2%, next to additional archaic Denisovan admixture in the Sahul region. Papuans may harbor varying degrees of deep admixture from "a lineage basal to West and East Asians occurred sometimes between 45 and 38 ka," although they are generally regarded "as a simple sister group of Tianyuan" ("Basal East Asians"). They are also closely related to Andamanese Onge and East Asians and mainly differ due to their Denisovan admixture. It is suggested that Papuans may have underwent a secondary admixture event with Altai-related Denisovan populations after they diverged from the ancestors of East Asians, who already mixed with Denisovans. This event was separate from the admixture event experienced by Filipino Negritos, explaining why Papuans have relatively lower Denisovan ancestry. Potential genetic input from a "super-archaic" human lineage, which diverged from the ancestors of modern humans and the ancestor of Neanderthals and Denisovans, may also found within the Denisovan ancestry of Papuans. According to a 2025 study, Papuans are a sister group to East Asians with no genetic input from earlier Out-of-African populations. They diverged from Europeans about 51,200 years ago, from East Asians about 46,200 years ago, and mixed with Denisovans about 31,200 years ago, contributing to about 3.23% of their genetic makeup. Compared to Europeans and East Asians, Papuans also experienced severe bottlenecking.

Papuans display pronounced genetic diversity, explained through isolation and drift between different subgroups after the settlement of New Guinea. The most notable differentiation was found to be between Highlanders and Lowlanders. Papuan Highlanders fall into three clusters, but form a single clade compared against Lowlanders. The Highlanders underwent a population bottleneck around 10,000 years ago, associated with the adoption of Neolithic lifestyles. Papuan Lowlanders display increased diversity and can be broadly differentiated into a Southern Lowlander cluster and a Northern Lowlander cluster. The genetic differentiation among Papuans is suggested to date back at least 20,000 years ago, while the sub-structure among Highlanders dates back around 10,000 years ago, with higher diversity among western Highlanders than Eastern ones. The genetic diversity is paralleled by linguistic and cultural diversity. East Asian-related admixture is also observed in some modern Papuans, especially coastal Papuan groups.

Based on a reevaluation of mitogenomes, Gandini et al. 2025 proposed a "long chronology," which suggested an earlier settlement of Sahul by two migration routes around 60,000 years ago. One route came from northern Sunda via the Philippine archipelago whilst the other came from southern Sunda via Mainland Southeast Asia, with both routes ultimately tracing back to South Asia. The settlers that undertook these routes were ancestral to populations indigenous to Australia, New Guinea and Oceania, and related to other East Eurasians instead of belonging to a separate wave. The genetic divergence between the indigenous inhabitants of Sahul and Sunda was also believed to be ancient and rapid.

Archaic introgression

Based on his genetic studies of the Denisova hominin, an ancient human species discovered in 2010, Svante Pääbo claims that ancient human ancestors of the Papuans interbred in Asia with these humans. He has found that people of New Guinea share 4–7% of their genome with the Denisovans, indicating this exchange. Denisovan introgressions may have influenced the immune system of present-day Papuans and potentially favoured "variants to immune-related phenotypes" and "adaptation to the local environment."

ASPM gene

In a 2005 study of Abnormal Spindle-like, Microcephaly (ASPM) gene variants, Nitzan Mekel-Bobrov et al. found that the Papuan people have among the highest rate of the newly evolved ASPM Haplogroup D, at 59.4% occurrence of the approximately 6,000-year-old allele. While it is not yet known exactly what selective advantage is provided by this gene variant, the haplogroup D allele is thought to be positively selected in populations and to confer some substantial advantage that has caused its frequency to rapidly increase.

Papuan ethnic groups

The following indigenous peoples live within the modern borders of Indonesia and Papua New Guinea. Austronesian-speaking (AN) groups are given in italics.

Indonesia

West Papua

Papuan ethnic groups/tribes in the Indonesian province of West Papua include: Arfak (Hatam, Meyah, Moile, dan Sougb), Borai, Numfor-Doreri, Irarutu, Koiwai, Kuri, Madewana, Mairasi, Maniwak, Mbaham-Matta, Miere, Moru, Moskona, Napiti, Oburauw, Roon, Roswar, Sebyar (Damban-Kimbaran) , Soviar, Sumuri, Wamesa, Warumba, Waruri, Wondama.

Southwest Papua

Papuan ethnic groups/tribes in the Indonesian province of Southwest Papua include Abun, Ambel, Batanta, Biak (Betew, Kafdaron, Karon, Usba, Wardo), Biga, Butlih, Domu, Duriankere, Gebe (Gag), Fiawat, Imekko (Inanwatan-Bira, Matemani-Iwaro, Kais, Awe, Kokoda-Emeyode), Irires, Ma'ya (Kawe, Laganyan, Wawiyai), Matbat-Matlow, Maybrat (Ayamaru, Mare, Karon Dori-Miyah, Aifat, Aitinyo, Wayer), Moi-Ma'ya, Moi, Mpur, Nerigo, Tehit, Tepin, Yahadian, Yaben-Konda.

Papua

Papuan ethnic groups/tribes in the Indonesian province of Papua include:

Highland Papua

Papuan ethnic groups/tribes in the Indonesian province of Highland Papua include:

Central Papua

Papuan ethnic groups/tribes in the Indonesian province of Central Papua include:

South Papua

Papuan ethnic groups/tribes in the Indonesian province of South Papua include:

Papua New Guinea

• Abelam
• Angu
• Baruya
• Biangai
• Bilibil
• Chambri
• Duna
• Etoro
• Fore
• Gadsup
• Gogodala
• Haroli
• Hewa
• Huli
• Iatmul
• Kaluli
• Kwoma
• Koteka
• Maisin (AN with many non-AN elements)
• Melpa
• Mian
• Morkai
• Motu
• Min
• Mundugumor
• Ogea
• Orokaiva
• Sambia
• Swagap
• Tairora
• Tanga
• Telefol
• Tsembaga
• Urapmin
• Wiru
• Wola
• Wopkaimin
• Yaifo
• Zia

Bismarck Archipelago

• Baining
• Tolai
• Trobriand