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Abalone (molecular mechanics)

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  • 1 chapter

Related on Lably

Through Ligand and Coordination complex

Key features

  • 3D molecular graphics
  • Automatic Force Field generator for bioelements: H, C, N, O
  • Building and editing chemical structures
  • Library of building blocks
  • Force fields: Assisted Model Building with Energy Refinement (AMBER) 94, 96, 99SB, 03; Optimized Potentials for Liquid Simulations (OPLS)
  • Geometry optimizing
  • Molecular dynamics with multiple time step integrator
  • Hybrid Monte Carlo
  • Replica exchange
  • Interface with quantum chemistry - ORCA, NWChem, Firefly (PC GAMESS), CP2K
  • GPU accelerated molecular modeling

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